Efficient Scalable Algorithms for Solving Dense Linear Systems with Hierarchically Semiseparable Structures
نویسندگان
چکیده
Hierarchically semiseparable (HSS) matrix techniques are emerging in constructing superfast direct solvers for both dense and sparse linear systems. Here, we develop a set of novel parallel algorithms for key HSS operations that are used for solving large linear systems. These are parallel rank-revealing QR factorization, HSS constructions with hierarchical compression, ULV HSS factorization, and HSS solutions. The HSS tree-based parallelism is fully exploited at the coarse level. The BLACS and ScaLAPACK libraries are used to facilitate the parallel dense kernel operations at the fine-grained level. We appply our new solvers for discretized Helmholtz equations for multifrequency seismic imaging and iteratively solve time-harmonic seismic inverse boundary value problems. In particular, we use the HSS algorithms to solve the dense Schur complement systems associated with the root separator of the separator tree obtained from nested dissection of the graph of discretized Helmholtz equations. We demonstrate that the new approach is much faster and uses much less memory than the LU factorization algorithm for both two-dimensional and three-dimensional problems, using up to 8912 processing cores. This is the first work in parallelizing HSS algorithms and conducting detailed performance analysis on a large parallel machine. This also lays a good foundation for developing scalable sparse structured factorization algorithms for general sparse linear systems.
منابع مشابه
Efficient Scalable Algorithms for Hierarchically Semiseparable Matrices
Hierarchically semiseparable (HSS) matrix algorithms are emerging techniques in constructing the superfast direct solvers for both dense and sparse linear systems. Here, we develope a set of novel parallel algorithms for the key HSS operations that are used for solving large linear systems. These include the parallel rank-revealing QR factorization, the HSS constructions with hierarchical compr...
متن کاملMulti-layer Hierarchical Structures and Factorizations
We propose multi-layer hierarchically semiseparable (MHS) structures for the fast factorizations of dense matrices arising from multi-dimensional discretized problems such as certain integral operators. The MHS framework extends hierarchically semiseparable (HSS) forms (which are essentially one dimensional) to higher dimensions via the integration of multiple layers of structures, i.e., struct...
متن کاملParallel Randomized and Matrix-Free Direct Solvers for Large Structured Dense Linear Systems
We design efficient and distributed-memory parallel randomized direct solvers for large structured dense linear systems, including a fully matrix-free version based on matrix-vector multiplications and a partially matrix-free one. The dense coefficient matrix A has an off-diagonal low-rank structure, as often encountered in practical applications such as Toeplitz systems and discretized integra...
متن کاملEfficient Parallel Algorithms for Hierarchically Semiseparable Matrices
Recently, hierarchically semiseparable (HSS) matrices have been used in the development of fast direct sparse solvers. Key applications of HSS algorithms, coupled with multifrontal solvers, appear in solving certain large-scale computational inverse problems. Here, we develop massively parallel HSS algorithms appearing in these solution methods, namely, parallel HSS construction using the rank ...
متن کاملFast algorithms for hierarchically semiseparable matrices
Semiseparable matrices and many other rank-structured matrices have been widely used in developing new fast matrix algorithms. In this paper, we generalize the hierarchically semiseparable (HSS) matrix representations and propose some fast algorithms for HSS matrices. We represent HSS matrices in terms of general binary HSS trees and use simplified postordering notation for HSS forms. Fast HSS ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- SIAM J. Scientific Computing
دوره 35 شماره
صفحات -
تاریخ انتشار 2013